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HTML5 canvas genomics graphic library
About
Scribl is a javascript, Canvas-based graphics library that easily generates biological visuals of genomic regions, alignments, and assembly data. Scribl can also be used in conventional offline pipelines, since everything needed to generate charts can be contained in a single html file.
Quick Start
// Get Canvas
var canvas = document.getElementById(canvasName);
// Create Chart with canvas, width
chart = new Scribl(canvas, 500);
// Add Gene with position, length, orientation
gene1 = chart.addGene( 5, 750 , '+');
// Draw Chart
chart.draw();
var canvas = document.getElementById(canvasName);
// Create Chart with canvas, width
chart = new Scribl(canvas, 500);
// Add Gene with position, length, orientation
gene1 = chart.addGene( 5, 750 , '+');
// Draw Chart
chart.draw();
Examples
Simple
Builder
Genbank
Colors
Viewer
Drag Drop
Tracks
Events
Complex
Using Scribl
PfvsaDB - A database of variant surface
antigens from Plasmodium falciparum isolates
antigens from Plasmodium falciparum isolates
Contact us to get
your project added here
your project added here
Documentation
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Authors
Scribl was started by Chase Miller in Dr. Michelle Meyer's lab at Boston College. It is currently being actively developed by Chase Miller in Dr. Gabor Marth's lab. The publication can be found here
Bugs/Suggestions
Send all bugs and suggestions to chmille4-at-gmail-dot-com